In this chapter, you will learn and review high-yield aspects of toxicology and metabolic disease that are frequently tested on board examinations and the RITE®. Real patient pathology and MRI images, flashcards, and a question bank are included for a complete learning experience!
Authors: Steven Gangloff MD, Brian Hanrahan MD
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Drugs of Abuse
Alcohol
- Alcohol’s mechanism of action is not entirely understood, but it acts as an agonist of gamma-aminobutyric acid (GABA, the primary inhibitory neurotransmitter in the CNS) .
- Acute intoxication:
- Presents with slurred speech, incoordination, unsteady gait, and nystagmus.
- Chronic EtOH:
- Can cause vitamin deficiencies such as B12 deficiency and B1 deficiency-related Wernicke’s encephalopathy and Wernicke-Korsakoff disease. See below regarding vitamin deficiencies.
- Subcortical alcohol-related dementia.
- Cerebellar atrophy
- Marchiafava-Bignami disease
- Corpus callosum damage.
- Presents with a sudden onset of stupor, coma, and seizures. Can also present with dementia, gait problems, psychiatric disturbances, incontinence, hemiparesis, aphasia, and apraxia of the left hand (due to callosal disconnection).
Methanol
- Ingested as an alcohol substitute and in suicide attempts.
- Methanol → formaldehyde → formic acid.
- Presents with a headache, confusion, hyperventilation and anion gap metabolic acidosis, and visual deficit.
- Pathology: Necrosis and hemorrhage of the putamen and toxic optic neuropathy.
- Treatment: bicarbonate and fomepizole are first-line. Ethanol works similarly to fomepizole. Dialysis may also be needed.
Ethylene Glycol
- Presents with edema and petechial hemorrhages secondary to calcium oxalate deposits within vessels.
PCP
- Presents with nystagmus, hypertension, tachycardia, muscle rigidity, dysarthria, decreased response to pain, and seizures.
Bath salts/methylenedioxypyrovalerone (MDPV)
- Presents with hypertension, tachycardia, delusions, hallucinations, and violent behavior.
Opioids
- Acute overdose will present with miosis (constricted pupils), hypotension, bradycardia, and decreased respirations.
- Can be treated with naloxone.
- Constipation can occur with chronic use.
- Long-term treatment for opioid dependence includes naltrexone (long-acting opioid antagonist), methadone, or buprenorphine.
- Withdrawal symptoms include lacrimation, rhinorrhea, diaphoresis, mydriasis, and yawning.
- Clonidine (alpha 2-receptor agonist) can blunt the sympathetic symptoms associated with opioid withdrawal.
- Meperidine is metabolized into a neurotoxic metabolite that can provoke myoclonus, tremors, and seizures.
Benzodiazepines
- Mechanism: Increases frequency of GABAA channel opening.
- Barbiturates, on the other hand, increase the duration of GABAA opening.
- Most benzodiazepines are metabolized by the cytochrome p450 system.
- Lorazepam, oxazepam, and temazepam, however, undergo direct glucuronidation without cytochrome p450 metabolism and therefore can be used in patients with renal or hepatic dysfunction with only minor effects on pharmacokinetics.
Cocaine
- Works by inhibiting dopamine reuptake and increasing dopamine concentrations in the nucleus accumbens. Also inhibits the reuptake of serotonin and norepinephrine.
- Acute intoxication presents with mydriasis, euphoria, and tachycardia.
Amphetamines
- Amphetamine intoxication presents similarly to cocaine, except the mechanism of action is through both the direct release of dopamine and norepinephrine and the inhibiting of reuptake.
Nitrous Oxide (inhaled)
- Exam: progressive paresthesias secondary to myelopathy of the posterior and lateral columns, mimicking B12 deficiency. Additional symptoms include ataxia, weakness, and positive Lhermitte’s sign.
- Pathophysiology: Irreversible oxidization of methylcobalamin which interferes with the vitamin B12-dependent conversion of homocysteine to methionine as well as methyl-malonyl CoA into succinyl CoA. Homocysteine levels will be elevated. Treat with methionine supplementation.
Glue (Toluene)
- Inhalation of toluene causes myelin damage and diffuse leukoencephalopathy.
“Chasing the Dragon”
- Inhalation of heated heroin or morphine fumes. Can produce a toxic leukoencephalopathy.
Supplements, Botany, & Foods
Caffeine
- Can cause restlessness, nervousness, diuresis, GI disturbance, muscle twitching.
Seafood toxins
- Ciguatoxin (CTX):
- Presents first with nausea and vomiting, followed then by paresthesias and dysesthesias and cold sensitivity. Symptoms tend to more sensory than motor.
- Pathophysiology: Membrane depolarization of the peripheral nervous system due to an opening of voltage-gated sodium channels via ciguatoxin. This preferentially affects the peripheral nervous system. Motor nerves and autonomic/central nervous systems are less affected than sensory nerves.
- Tetrodotoxin (Pufferfish), saxitoxin (shellfish) and conotoxin (Sea snails):
- Present with paralysis, not sensory phenomena, via sodium channel depolarization.
- Maitotoxin:
- Produced by dinoflagellates, which can grow on ciguatera fish.
- Activates voltage-dependent calcium channels and usually produces bradycardia and hypotension.
Cassava
- Cassava contains small amounts of cyanide and low protein. High/exclusive intake (due to food scarcity) causes konzo, a permanent upper motor neuron spastic paraparesis secondary to cyanide accumulation.
Incidental Ingestions or Exposures
Carbon Monoxide
- When inhaled it binds to hemoglobin with 100 times the affinity of oxygen, leading to poor oxygen-carrying capacity.
- Will be seen in patients with wood-burning stoves in the winter or in suicide attempts from motor vehicle fumes.
- Burning homes cause carbon monoxide and cyanide poisoning from burning synthetic polymers (i.e. vinyl couch).
- Treatment: 100% O2 or hyperbaric O2.
- Pathology: Bilateral globus pallidus necrosis and hemorrhage. Gross pathology will show a swollen congested brain with a cherry red color.
- Imaging: T2 hyperintense globus pallidi. The globus pallidus will also have reduced diffusion of DWI sequences.
Botulism
- Presents with muscle weakness, ptosis, dysphagia, double/blurred vision, autonomic dysfunction and altered mental status.
- Infants present with hypotonia and characteristic raspy cry.
- Exposure is often through the environment: inhaled spores from the soil.
- Foodborne botulism
- Adults present 18 to 36 hours after eating contaminated food
- Common foods are home-canned goods or honey.
- Wound botulism
- Can occur secondary to parenteral drug use.
- Will present 10-14 days after exposure.
- Pathophysiology: Inhibition of acetylcholine release from the presynaptic neurons due to inhibition of SNARE (soluble NSF attachment protein receptor) proteins.
Organophosphate poisoning
- Presents with pinpoint pupils, excessive salivation, weakness, and respiratory failure in severe cases.
- Often seen in farmers due to insecticide exposure.
- Mechanism of action: aggressive acetylcholinesterase inhibition.
Heavy Metals and Industrial Chemicals
Mercury
- Methylmercury:
- Ingested, such as in large fish.
- Presents with incoordination, impaired speech and hearing, peripheral vision loss, and paresthesias.
- Inorganic Mercury:
- Ingested in contaminated water.
- Presents with GI upset, rash, and mood swings.
- Metallic mercury:
- Exposure is usually through inhalation of vapors or droplets into the lungs.
- Presents with mood swings, irritability, nervousness, insomnia, weakness, twitching, headaches, and poor mental performance.
- Pathology: Neuronal loss in the superior cerebellar vermis.
Lead
- Presents with a headache, abdominal pain, and motor neuropathy that affects the radial nerve preferentially. Can also have bluish coloration of the gingiva.
- Pathology: Microcytic hypochromic anemia with basophilic stippling.
- Pathophysiology: Affects porphyrin metabolism.
Arsenic
- Presents with garlic breath, paresthesias similar to diabetic neuropathy, and nail deposits.
- Pathophysiology: oxidative stress, and inhibition of pyruvate decarboxylase and acetylcholinesterase.
Aluminum
- Acute toxicity can cause encephalopathy, ataxia, tremor, and spinocerebellar degeneration.
- Exposure in factories or cooking methadone in aluminum pots.
- Chronic exposure contributes to neural aging and inflammation to a degree, and may possibly be involved in chronic neurodegenerative diseases like Alzheimer’s.
Manganese
- Exposure through prolonged parenteral nutrition, extreme herbal tea intake, or welding fumes. Excreted in bile, so biliary atresia causes accumulation also.
- Pathophysiology: accumulates in basal ganglia and anterior midbrain.
- Manganese toxicity presents with treatment-resistant Parkinsonism and dystonia.
- Brain MRI shows bilateral T1 hyperintensity of the globi pallidi. The midbrain and striatum can also be involved.
- Treatment: dopamine replacement plus manganese chelation therapy with EDTA. Chelation may slow the progression, but does not likely reverse damage.
Lithium (Acute Overdose)
- Presents with GI distress first, then progresses to tremor, myoclonic jerks, seizures, and rigidity.
- Can develop SILENT syndrome: Syndrome of Irreversible Lithium-Effectuated Neurotoxicity.
- If having neurologic symptoms, treatment is dialysis.
Thallium
- Presents with cranial neuropathy, autonomic findings, and alopecia.
- Competes with K+ ions at the Na/K ATP channel.
Cadmium
- Long half-life allows for accumulation over time, causing peripheral polyneuropathy, olfactory nerve damage, neurodegenerative dementia, and Parkinsonism.
- Exposure in battery and electroplating factories.
- Mechanism: Increases oxidative damage. Also increases blood-brain barrier permeability.
Acrylamide
- Presents with ataxia, fatigue, and peripheral neuropathy.
- Inhibits axonal transport via accumulation within neurofilaments, causing necrosis of myelinated nerves.
Parkinsonian Toxins
- Parkinsonism, and frank Parkinson’s disease, are associated with a number of toxic exposures:
- MPTP (a synthetic opioid), manganese poisoning, hexane and toluene (inhaled solvents), rotenone (insecticide), carbon monoxide, carbon disulfide.
Withdrawal Syndromes
Alcohol withdrawal
- The most life-threatening withdrawal syndrome.
- Presents with anxiety, tachycardia, sweating, and can progress to seizures, hallucinations, and delirium tremens.
- Delirium tremens: Usually occurs on day 3 from the last drink, and lasts up to 3 days. Can present with rapid onset confusion, irregular heart rate, hallucinations, seizure, and can cause death.
Heroin withdrawal
- Presents with diaphoresis, piloerection, hypersalivation, tearing, yawning, dilated pupils, nausea/vomiting, paranoia, irritability.
MDMA withdrawal
- Presents with hyperthermia, diaphoresis, tachycardia, and jaw soreness (bruxism is frequently seen with MDMA use).
SSRI withdrawal
- Paroxetine has the shortest half-life, and thus the most likely to cause withdrawal symptoms.
- Presents with depression and insomnia.
Cocaine withdrawal
- Presents with hypersomnia, fatigue, hyperphagia, and dysphoria.
Metabolic Disorders
Pantothenate kinase-associated neurodegeneration (PKAN)
- Also called Hallervorden-Spatz disease.
- Presents with dysarthria, spasticity, choreoathetosis, pigmented retinopathy, equinovarus deformity.
- Secondary to pantothenate kinase gene (PANK2), Ch 20p13.
- Pathology: Iron accumulation within the globus pallidum and pars reticularis.
- Radiology: MRI will show an “eye of the tiger sign”; there is a hypointense lesion in the bilateral basal ganglia with a central hyperintensity which represents gliosis.
Acid α-glucosidase deficiency (Pompe disease)
- Also known as glycogen storage disease type II or acid maltase deficiency, this autosomal recessive enzyme deficiency causes glycogen accumulation in lysosomes in organs, especially heart, muscle, and CNS.
- Due to mutations of the GAA gene.
- Infantile Pompe disease: presents in the first few months of life with hypotonia, macroglossia, failure to thrive, and cardiomyopathy.
- Late-onset Pompe disease: variable severity of presentation, usually without cardiomyopathy. Can present from years to decades of life.
- Diagnosis: screening dried blood spots (DBS) and confirmatory GAA mutation genetic analysis.
- Pathology: PAS+ glycogen-filled lysosomes (vacuolar myopathy) on muscle biopsy.
- EMG may show myotonia.
- Treatment: enzyme replacement with alglucosidase alfa.

GLUT-1 deficiency
- Presents with refractory seizures in an infant with developmental delay, microcephaly, hypotonia, spasticity, ataxia, and dystonia.
- Pathophysiology: Mutation in SLC2A1 causes GLUT-1 deficiency, and thus unable to transport glucose into the brain, which results in low CSF glucose, while lactate is low-normal.
- Treatment: Ketogenic diet because it converts brain energy utilization from primarily glucose to an alternative fuel source of ketones.
Galactosemia
- Deficiency of Galactose 1-phosphate uridyl transferase.
- Intellectual disability, cataracts, failure to thrive, increased ICP, cerebral edema. Susceptible to E. coli infections.
- Treatment: eliminate lactose and galactose from the diet.
Urea cycle enzyme deficiencies
- Exam: If partial, adolescent or early adult-onset neuropsychiatric symptoms including episodic psychosis, depression, and bipolar disorder. These attacks frequently accompanied by gastrointestinal symptoms can be precipitated by high protein ingestion, periods of fever, and can be triggered by valproate
- X-linked UCD can present with strokes.
Phenylketonuria (PKU)
- Phenylalanine hydroxylase deficiency → phenylalanine (Phe) and derivatives build up → neuron death.
- Presents with delayed developmental, short stature, intellectual disability, mouse-like musty odor, possible seizures.
- Treatment: Diet restricted in Phe and protein.
Kearns-Sayre syndrome
- Mitochondrial inheritance disorder that presents with the triad of:
- Chronic progressive external ophthalmoplegia
- Retinitis pigmentosa
- Onset before 20 years of age.
- Also can commonly have heart block, short stature, sensorineural hearing loss, cerebellar ataxia and endocrine dysfunction.
- CSF will have elevated protein.
- As with many mitochondrial disorders, may see ragged red fibers on pathology.
Glutaric acidemia type I (GA 1)
- Deficiency of mitochondrial enzyme glutaryl-CoA dehydrogenase activity causes progressive macrocephaly, striatal necrosis, basal ganglia and frontotemporal degeneration.
- Elevated levels of serum GA, 3HGA, tGA.
Methylmalonic acidemia (MMA)
- deficiency of mitochondrial enzyme L-methylmalonyl-CoA mutase activity causes MMA and lactic acid build-up.
- Presents in infancy (after proteins added to diet) with developmental delay, lethargy, hypotonia, hepatomegaly, coma, and sometimes death.
- marked bilateral destruction of the globus pallidus
- Treatment: Low protein diet. Some are responsive to vitamin B12 injections.
Maple syrup urine disease
- Mitochondrial branched-chain α-ketoacid dehydrogenase deficiency →
- accumulation of branched-chain amino acids.
- Newborns with poor feeding, opisthotonic posturing, hypertonia, failure to thrive, and seizures. Urine with maple syrup scent.
- MR spectroscopy with a branched-chain amino acid spike.
Biotinidase deficiency
- Presents with alopecia, skin rash, developmental delay, visual/hearing impairment, and seizures.
- MRI shows hyperintensity in periventricular white matter and atrophy.
- Treatment: responds to high doses of oral biotin (vitamin B7).
X-linked adrenoleukodystrophy (X-linked ALD)
- ABCD1 gene/protein mutation → impaired peroxisomal β-oxidation → accumulation of very-long-chain fatty acids.
- Varied presentation, but affects bilateral white matter of the brain and adrenal glands.
- Most common presentation is either childhood (4–8 years old) or adult form, with rapidly progressive ataxia, spasticity, personality change, visual/auditory deficits, and seizures.
- MRI is strongly suggesting, showing a bilateral posterior to anterior progression of white matter disease.
Zellweger syndrome
- Also known as cerebrohepatorenal syndrome.
- Occurs secondary to peroxisomal dysfunction due to a PEX gene mutation.
- Infantile form presents with hypotonia, craniofacial dysmorphisms, glaucoma, and sensorineural hearing loss.
- Blood work will show elevated very-long-chain fatty acids.
Homocystinuria
- Symptoms include myopia, dislocation of the lens at the front of the eye (lens subluxation), increased risk of blood clotting, osteoporosis, sometimes developmental delay and learning problems.
- Mutation in CBS gene
(cystathione-β-synthase) - Buildup of homocysteine and methionine.
- Treatment: Low protein diet, Vitamin B6, and betaine, folate (B9), and cobalamin (B12).
Wilsons disease
- Copper accumulation due to errors of copper transport. Read more in the Movement Disorders Chapter.

Lysosomal storage disorders
Mucopolysaccharidoses (MPS)
Vitamins & Electrolytes
Vitamin A deficiency
- Vitamin A is important for both epithelial cell proliferation and retinal cell function, and thus deficiency can cause keratomalacia and is the leading cause of childhood blindness worldwide.
Vitamin B1 (thiamine) deficiency
- Can cause dry or wet beriberi, Wernicke’s encephalopathy, or Wernicke-Korsakoff syndrome
- Seen in patients with malnourishment (i.e. bariatric surgery, anorexia, alcoholism)
- Dry beriberi: Bilateral peripheral motor and sensory neuropathy with weakness and hyporeflexia. (Wet beriberi is primarily a cardiac disease with cardiac failure).
- Wernicke’s encephalopathy:
- Triad of confusion, ataxia, and nystagmus. Also can have extraocular motility deficiencies.
- Wernicke-Korsakoff Syndrome: Chronic and irreversible progression of mental impairment with short-term memory loss and confabulation.
- Imaging: MRI will show hyperintense signals in the periaqueductal gray area, mammillary bodies, and dorsal medial nucleus of the thalamus.
- Treatment: Vitamin B1 replacement.
- If replacing B1 in alcoholics, make sure it is given prior to glucose. Giving glucose before B1 replacement can lead to worsening of Wernicke’s encephalopathy.
Vitamin B3 (Niacin) deficiency
- Causes a disease called pellagra. Occurs as a result of malnutrition or absorption problems.
- Triad: “The 3 D’s” of dementia, dermatitis, and diarrhea. Other neurologic manifestations include peripheral neuropathy and myelopathy.
Vitamin B6 (pyridoxine) deficiency
- Can be caused by long term treatment with the tuberculosis drug Isoniazid.
- Can cause an axonal neuropathy with hyporeflexia and weakness, and/or seizures.
- Vitamin B6 toxicity is rare but can cause a sensory neuronopathy affecting dorsal root and trigeminal ganglia.
Vitamin B9 (folate) deficiency
- During in utero development, causes spina bifida and anencephaly. Folate deficiency in infants can cause irritability, ataxia, psychomotor retardation, and optic neuropathy.
- Recommended daily intake:
- 400 mcg for women of child-bearing age
- 4000 mcg during pregnancy if history of a child with a neural tube defect.
Vitamin B12 (cobalamin) deficiency
- Caused by low intake (vegan diet), pernicious anemia, fish tapeworm (Diphyllobothrium), ileal resection, nitrous oxide abuse, and inflammatory bowel disease.
- The terminal ilium is particularly important for absorption of vitamins B12, A, D, E and K.
- Can cause subacute combined degeneration affecting the posterior columns and lateral corticospinal tracts, evidenced by proprioception deficits.
- Concurrent symptoms: Macrocytic anemia
- Homocysteine and methylmalonic acid may be elevated.
- Treatment: Replete vitamin B12, unless the deficit is caused by nitrous oxide abuse, then use methionine.
Vitamin E deficiency
- Associated with adult-onset cerebellar ataxia.
- Can be seen in patients with cystic fibrosis, Crohn’s disease, short bowel syndrome
- A mutation of the gene encoding for alpha-tocopherol-transfer protein (a-TTP) can also cause Vitamin E deficiency.
- Exam: truncal and limb ataxia, decreased deep tendon reflexes, decreased vibratory and position sense.
Primary CoQ-10 deficiency
- Can produce a myopathy or progressive cerebellar degeneration, reflecting the key role of CoQ-10 as an electron shuttle between complexes I or II and complex III in the electron transport chain.
Copper deficiency
- Presents with myelopathy and polyneuropathy, comparable to subacute combined degeneration from vitamin B12 deficiency.
- Commonly caused by malabsorption disease such as bariatric surgery, overuse of cold prevention supplements, or from zinc toxicity.
- Zinc toxicity: Can be secondary to frequent usage of denture adhesive cream.
- Serum copper and ceruloplasmin will be low if checked.
Zinc deficiency
- Helps regulate GABA and glutamate neurotransmission, and deficiency in utero and early life can cause intellectual disability, tremors, and rash.
Hyponatremia
- Can present with delirium, weakness, and seizures
- Can be seen in marathon runners.
- Rapid correction of sodium can lead to central pontine myelinolysis (CPM).

Abetalipoproteinemia
- Mutation in microsomal triglyceride transfer protein (MTTP) causes malabsorption of numerous fats and vitamins.
- Posterior column demyelination, ataxia, weakness, vision loss, retinitis pigmentosa, acanthocytosis, intellectual disability.
Other Metabolic/Toxic syndromes
Hepatic encephalopathy
- Presents in patients with end-stage liver disease due to the accumulation of neurotoxic substances
- Symptoms include altered mental status, asterixis, and in severe cases coma.
- Elevated ammonia levels are seen
- Head imaging may reveal diffuse cerebral edema or T1 hyperintensities in the basal ganglia
- Electroencephalogram may reveal generalized periodic waves with triphasic morphology.
Posterior Reversible Encephalopathy Syndrome (PRES)
- Presents with seizures, altered mental status, vision changes, and focal neurologic symptoms.
- Risk factors include bevacizumab, tacrolimus, cyclosporine, eclampsia, uremia, and extreme hypertension.
- Pathophysiology: Dysfunction of the posterior circulation autoregulation.
- Imaging: Symmetric subcortical/cortical vasogenic edema seen predominantly in the occipital and parietal lobes.

- Treatment: Discontinuing the causal agent and/or treating uncontrolled blood pressure. Patients often have a near-complete recovery.
Fahr disease
- Presents with abnormal calcification within the basal ganglia, and thalamus.
- Symptoms include headache, movement disorders, and seizures.
References
- Singh AP, Goel RK, Kaur T. Mechanisms pertaining to arsenic toxicity. Toxicol Int. 2011;18(2):87-93.
- Wang B, Du Y. Cadmium and its neurotoxic effects. Oxid Med Cell Longev. 2013;2013:898034.
- The Metal Neurotoxins: An Important Role in Current Human Neural Epidemics?. Int J Environ Res Public Health. 2017;14(12):1511. Published 2017 Dec 5.
- The neurotoxicity of environmental aluminum is still an issue. Neurotoxicology. 2010;31(5):575-81.
- Manganese deposits in patients with biliary atresia after hepatic porto-enterostomy. Ikeda, Shinji et al. Journal of Pediatric Surgery , Volume 35 , Issue 3 , 450-453.
- Iinuma Y, Kubota M, Uchiyama M, Yagi M, Kanada S, Yamazaki S, et al. Whole-blood manganese levels and brain manganese accumulation in children receiving long-term home parenteral nutrition. Ped Surg Int 2003;19:268–72.
- Spencer PS, Palmer VS. Interrelationships of undernutrition and neurotoxicity: food for thought and research attention. Neurotoxicology. 2012;33(3):605-16.
- Karimzadeh P. Approach to Neurometabolic Diseases from a Pediatric Neurological Point of View. Iran J Child. Neurol. 2015 Winter;9(1): 1-16.
- Duarte, J. M., Schuck, P. F., Wenk, G. L., & Ferreira, G. C. (2013). Metabolic disturbances in diseases with neurological involvement. Aging and disease, 5(4), 238-55. doi:10.14336/AD.2014.0500238
- De Giorgis, V., Veggiotti, P., 2013. “GLUT1 deficiency syndrome 2013: Current state of the art,” Seizure: European Journal of Epilepsy. 22(10):803-11.
- Dasouki, M., Jawdat, O., Almadhoun, O., Pasnoor, M., McVey, A. L., Abuzinadah, A., Herbelin, L., Barohn, R. J., … Dimachkie, M. M. (2014). Pompe disease: literature review and case series. Neurologic clinics, 32(3), 751-76, ix.
- Pastores, G. M., & Maegawa, G. H. (2013). Clinical neurogenetics: neuropathic lysosomal storage disorders. Neurologic clinics, 31(4), 1051-71.
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